SIM Resolution Improvement

Estimate structured-illumination resolution from a measured widefield baseline and improvement factor.

Description

SIM resolution comparison divides a supplied widefield resolution by a chosen improvement factor.

SIM resolution comparison divides a supplied widefield resolution by a chosen improvement factor. A factor below one describes worsening.1

Estimate structured-illumination resolution from a measured widefield baseline and improvement factor.

When to use SIM Resolution Improvement

Use this tool to estimate structured-illumination resolution from a measured widefield baseline and improvement factor.

Prepare the optical measurements, geometry, fitted coefficients or caller-selected thresholds requested. Confirm wavelength, radius/diameter, pulse-width, angle and unit conventions before running the calculation.

How to use SIM Resolution Improvement and understand its results

  1. Prepare the optical measurements, geometry, fitted coefficients or caller-selected thresholds requested. Confirm wavelength, radius/diameter, pulse-width, angle and unit conventions before running the calculation.
  2. Enter widefieldResolutionNanometers, simImprovementFactor using the field table and calculation rules, then run the tool.
  3. Read simResolutionNanometers, resolutionImprovementPercent. The explanation below defines the units, signs, ordering and any flags or placeholder values.
  4. If the tool reports an input issue, correct the values and run it again. Apply the stated assumptions when interpreting a successfully returned result.
Input fieldMeaningValue type; see rules belowRequirement
widefieldResolutionNanometersWidefield resolution (nm)number; minimum: 0Required
simImprovementFactorSIM improvement factornumber; minimum: 0Required

Enter nonnegative baseline resolution and positive factor. Return resolution and signed percentage improvement.

resolution=baseline/factor; improvement%=100(1−1/factor)

Units, indexing, boundary conditions and exceptional cases are defined in the calculation rules above.

Output fieldMeaningValue type
simResolutionNanometersEstimated SIM resolution (nm)number; minimum: 0
resolutionImprovementPercentResolution improvement (%)number
json
{
  "input": {
    "widefieldResolutionNanometers": 250,
    "simImprovementFactor": 2
  },
  "output": {
    "simResolutionNanometers": 125,
    "resolutionImprovementPercent": 50
  }
}

Limitations and assumptions

No illumination pattern, reconstruction, aberration or photon-budget model is supplied.

Numeric inputs must be finite. Follow the calculation-specific rules for overflow, underflow and exceptional cases. Missing required fields, extra fields, wrong value types and violations of the calculation rules are input errors.

Alternative or Complementary methods

Use STED Resolution: Estimate idealized STED resolution from depletion and saturation intensities. For a complementary task, use Confocal Lateral Resolution: Estimate confocal lateral FWHM and a simple finite-pinhole adjustment.

References

  1. SIM Resolution Improvement — tool.io

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