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Allele Age Generations Year Crosswalk Tool

Calculate allele age generations year crosswalk from explicit caller-supplied inputs.

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Description

Multiply generations by central and symmetric lower/upper generation lengths.

Evolutionary time and branch length are linked through a supplied clock or calibration. A unit conversion, path sum or residual assumes the underlying tree and rate model rather than recovering them from biological data.

Multiply generations by central and symmetric lower/upper generation lengths.

When to use this tool

Use Allele Age Generations Year Crosswalk when you need one branch-time, path or calibration term.

How to use the tool and how it works

  1. Enter generations, generationYears, generationUncertainty. Use the units and conventions below.
  2. Run the tool. Correct any format, range, or cross-field input error before interpreting the output.
  3. Read years, minimumYears, maximumYears. Use the output convention below.

Require nonnegative generations, positive generationYears and uncertainty from zero through generation length. Multiply generations by central and symmetric lower/upper generation lengths.1

Input fieldMeaning and unitsAccepted input
generationsGenerationsRequired. Finite number; minimum 0.
generationYearsGeneration YearsRequired. Finite number; strictly above 0.
generationUncertaintyGeneration UncertaintyRequired. Finite number; minimum 0.
Output fieldInterpretationReturned shape
yearsYearsRequired. Finite number.
minimumYearsMinimum YearsRequired. Finite number.
maximumYearsMaximum YearsRequired. Finite number.
json
{
  "input": {
    "generations": 100,
    "generationYears": 25,
    "generationUncertainty": 5
  },
  "output": {
    "years": 2500,
    "minimumYears": 2000,
    "maximumYears": 3000
  }
}

Limitations and assumptions

  • Uncertainty is a caller-supplied interval, not a standard error or estimated confidence range. Generation length is fixed across all modeled generations.
  • Inputs must satisfy both the field types and the cross-field conditions above. Invalid input causes an error; a successful false flag or documented placeholder is a different result.
  • Numeric calculations use binary floating point unless exact decimal-integer arithmetic is explicitly stated. No hidden measurement tolerance or decimal rounding is added; nonfinite or out-of-contract results are rejected. Numeric signed-zero results are exported as zero.

Alternative or Complementary methods

Use a complete phylogenetic or dating method with the relevant sequence, fossil and rate evidence. Verify topology, branch units, calibration assumptions and uncertainty separately.

References

  1. Calculation and input contract: evolutionary-biology/allele-age-generations-year-crosswalk — tool.io

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