Cheng-Prusoff IC50
Convert an observed IC50 from a competitive binding assay to Ki with the Cheng-Prusoff equation: Ki = IC50 / (1 + [L]/Kd). The relationship assumes equilibrium competition at a single binding site without substantial tracer depletion.
Description
Convert an observed IC50 from a competitive binding assay to Ki with the Cheng-Prusoff equation: Ki = IC50 / (1 + [L]/Kd). The relationship assumes equilibrium competition at a single binding site without substantial tracer depletion.
Cheng-Prusoff IC50 is a focused biology tool that convert an observed IC50 from a competitive binding assay to Ki with the Cheng-Prusoff equation: Ki = IC50 / (1 + [L]/Kd). The relationship assumes equilibrium competition at a single binding site without substantial tracer depletion. It calculates locally from the values you enter and exposes the result without changing the source observations.1
When to use Cheng-Prusoff IC50
Use Cheng-Prusoff IC50 when you need to convert an observed IC50 from a competitive binding assay to Ki with the Cheng-Prusoff equation: Ki = IC50 / (1 + [L]/Kd). The relationship assumes equilibrium competition at a single binding site without substantial tracer depletion. Enter Observed IC50, Ligand concentration, and Kd using the definitions and units below so the result can be reproduced.
- Observed IC50
- Observed half-maximal inhibitory concentration in nanomolar; must be greater than zero.
- Ligand concentration
- Radioligand concentration used in the assay, in nanomolar; may be zero.
- Kd
- Radioligand dissociation constant, in nanomolar; must be greater than zero.
How Cheng-Prusoff IC50 calculates the result
The published tool contract uses this rule: Convert an observed IC50 from a competitive binding assay to Ki with the Cheng-Prusoff equation: Ki = IC50 / (1 + [L]/Kd). The relationship assumes equilibrium competition at a single binding site without substantial tracer depletion.
- True Ki
- True inhibition constant in nanomolar after correction.
Limitations of Cheng-Prusoff IC50
The calculation does not propagate measurement uncertainty, sampling error, or biological and chemical variability.
Alternative or Complementary measurements
Retain the original Observed IC50, Ligand concentration, and Kd values and their units alongside the result. IC50 Inhibition Conc is useful when you instead need to estimate the half-maximal inhibitory concentration by inverting the Hill equation. EC50 From Hill provides another view by helping you estimate the half-maximal effective concentration by inverting the Hill equation.
References
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IC50 — Wikipedia contributors
Similar or alternative tools
- IC50 Inhibition Conc
Estimate the half-maximal inhibitory concentration by inverting the Hill equation.
- EC50 From Hill
Estimate the half-maximal effective concentration by inverting the Hill equation.
- Selectivity Index
Compute the ratio of toxic IC50 to therapeutic IC50 for a compound.